Scine::Kinetx  3.0.0
Kinetic models for reaction networks.
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Class Hierarchy

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This inheritance list is sorted roughly, but not completely, alphabetically:
[detail level 1234]
oCScine::Kinetx::IntegratorBase class for all Runge-Kutta methods/implementations
|oCScine::Kinetx::CvodeSundials implementation called CVODE
|\CScine::Kinetx::IntegratorBase
| oCScine::Kinetx::Cvode::Impl
| \CScine::Kinetx::RungeKuttaBase class for all Runge-Kutta methods/implementations
|  oCScine::Kinetx::CashKarp5Numerical integration according to the cash-karp-5 algorithm. This algorithm automatically generates the time step. (Ref. https://arxiv.org/pdf/1309.2710.pdf, https://doi.org/10.1016/j.jcp.2013.09.025)
|  oCScine::Kinetx::ExplicitEulerEuler-type integration (dt * dy/dt)
|  \CScine::Kinetx::ImplicitEulerImplicit Euler-type integration algorithm (y_k+1 = dt f(t_k+1, y_k+1)), where f(t_k+1, y_k+1) is the reaction rate and k the integration step. Requires the Jacobian of the reaction system
oClist
|\Csetup.EmptyListWithLength
oCScine::Kinetx::Network
oCScine::Kinetx::NetworkBuilderA class allowing for easier building of reaction networks
\CScine::Kinetx::RandomNetworkFactoryA factory class for test networks