- r -

• read() : Scine::SwooseUtilities::AtomicInformationReader
• readListsOfNeighbors() : Scine::SwooseUtilities::ConnectivityFileHandler
• referenceDataIsSufficient() : Scine::MMParametrization::FragmentDataDistributor
• refineListsOfNeighbors() : Scine::MMParametrization::ConnectivityGenerator
• ReparametrizationHelper() : Scine::MMParametrization::ReparametrizationHelper
• reprotonateCriticalAtom() : Scine::StructurePreparation::ProtonationHandler
• RepulsionEvaluator() : Scine::MolecularMechanics::RepulsionEvaluator
• RepulsionParameters() : Scine::MolecularMechanics::RepulsionParameters
• RepulsionTerm() : Scine::MolecularMechanics::RepulsionTerm
• reset() : Scine::Qmmm::InteractionTermEliminator
• resetC6Matrix() : Scine::MolecularMechanics::SfamParameters
• resetExclusions() : Scine::MolecularMechanics::InteractionExclusion
• resetScaledInteractions() : Scine::MolecularMechanics::ScaledInteractions
• results() : Scine::MolecularMechanics::MolecularMechanicsCalculator , Scine::Swoose::MockQmCalculator , Scine::Qmmm::QmmmCalculator , Scine::Swoose::MockQmCalculator , Scine::MolecularMechanics::MolecularMechanicsCalculator , Scine::Qmmm::QmmmCalculator
• runCalculationsAndCollectResults() : Scine::MMParametrization::DatabaseHelper